charm.git
9 years agoMerge branch 'charm' of charmgit:charm into charm
Nikhil Jain [Sun, 13 Nov 2011 20:05:07 +0000 (14:05 -0600)]
Merge branch 'charm' of charmgit:charm into charm

9 years agoMerge branch 'charm' of charmgit:charm into charm
Gengbin Zheng [Sun, 13 Nov 2011 03:26:19 +0000 (21:26 -0600)]
Merge branch 'charm' of charmgit:charm into charm

9 years agofix group reduction after restart.
Gengbin Zheng [Sun, 13 Nov 2011 03:25:19 +0000 (21:25 -0600)]
fix group reduction after restart.
Using group reduction instead of all PEs sending to PE 0 to finish a checkpointing.

9 years agofixed CMK_CPP_CHARM path
Gengbin Zheng [Sat, 12 Nov 2011 15:30:25 +0000 (09:30 -0600)]
fixed CMK_CPP_CHARM path

9 years agofixed CMK_CPP_CHARM
Gengbin Zheng [Sat, 12 Nov 2011 15:28:37 +0000 (09:28 -0600)]
fixed CMK_CPP_CHARM

9 years agoallow +userMemoryPoolsize to use "G" "M" and "K" in the size parameter.
Gengbin Zheng [Sat, 12 Nov 2011 07:24:01 +0000 (23:24 -0800)]
allow +userMemoryPoolsize to use "G" "M" and "K" in the size parameter.

9 years agoMerge branch 'charm' of charmgit:charm into charm
Gengbin Zheng [Sat, 12 Nov 2011 07:16:51 +0000 (23:16 -0800)]
Merge branch 'charm' of charmgit:charm into charm

9 years agoalways compile with pxshm as default
Gengbin Zheng [Sat, 12 Nov 2011 07:16:08 +0000 (23:16 -0800)]
always compile with pxshm as default

9 years agoMeshStreamer: fixed a bug in periodic flushing scheme.
Lukasz Wesolowski [Sat, 12 Nov 2011 05:54:29 +0000 (23:54 -0600)]
MeshStreamer: fixed a bug in periodic flushing scheme.

9 years agofixed a bug when size<ONE_SEG
Yanhua Sun [Fri, 11 Nov 2011 23:12:42 +0000 (15:12 -0800)]
fixed a bug when size<ONE_SEG

9 years agofix CMK_CPP_CHARM
Gengbin Zheng [Fri, 11 Nov 2011 19:21:44 +0000 (13:21 -0600)]
fix CMK_CPP_CHARM

9 years agodefine CMK_CPP_CHARM
Gengbin Zheng [Fri, 11 Nov 2011 19:15:49 +0000 (13:15 -0600)]
define CMK_CPP_CHARM

9 years agodefine CMK_CPP_CHARM
Gengbin Zheng [Fri, 11 Nov 2011 19:13:55 +0000 (13:13 -0600)]
define CMK_CPP_CHARM

9 years agodefine CMK_CPP_CHARM
Gengbin Zheng [Fri, 11 Nov 2011 19:09:46 +0000 (13:09 -0600)]
define CMK_CPP_CHARM

9 years agobuild state space search library
Gengbin Zheng [Fri, 11 Nov 2011 05:17:50 +0000 (23:17 -0600)]
build state space search library

9 years agomove state space search engine library to ck-libs
Gengbin Zheng [Fri, 11 Nov 2011 05:02:01 +0000 (23:02 -0600)]
move state space search engine library to ck-libs

9 years agoMesh Streamer: Deleting msg after reduction is still causing a segfault,
Lukasz Wesolowski [Thu, 10 Nov 2011 23:47:31 +0000 (17:47 -0600)]
Mesh Streamer: Deleting msg after reduction is still causing a segfault,
so I am commenting the line out for now. Also, since caching the location
information leads to a slowdown on BG/P, I am commenting out the define
which makes it used by default.

9 years agoMerge branch 'charm' of charmgit:charm into charm
Gengbin Zheng [Thu, 10 Nov 2011 20:48:58 +0000 (12:48 -0800)]
Merge branch 'charm' of charmgit:charm into charm

9 years agoincrease malloc test to 8MB to overcome the case when it uses large pages.
Gengbin Zheng [Thu, 10 Nov 2011 20:48:25 +0000 (12:48 -0800)]
increase malloc test to 8MB to overcome the case when it uses large pages.

9 years agoMerge branch 'charm' of charmgit:charm into charm
Gengbin Zheng [Thu, 10 Nov 2011 19:56:13 +0000 (14:56 -0500)]
Merge branch 'charm' of charmgit:charm into charm

9 years agosupport for intel compiler on cray
Gengbin Zheng [Thu, 10 Nov 2011 19:55:54 +0000 (14:55 -0500)]
support for intel compiler on cray

9 years agominor change to the stealing scheme
Gengbin Zheng [Thu, 10 Nov 2011 18:31:11 +0000 (10:31 -0800)]
minor change to the stealing scheme

9 years agoMerge branch 'charm' of charmgit:charm into charm
Gengbin Zheng [Thu, 10 Nov 2011 17:15:21 +0000 (09:15 -0800)]
Merge branch 'charm' of charmgit:charm into charm

9 years agosupport for intel compilers
Gengbin Zheng [Thu, 10 Nov 2011 17:13:16 +0000 (09:13 -0800)]
support for intel compilers

9 years agoremove print information
Yanhua Sun [Thu, 10 Nov 2011 04:58:18 +0000 (20:58 -0800)]
remove print information

9 years agoMerge branch 'charm' of charmgit:charm into charm
Yanhua Sun [Thu, 10 Nov 2011 04:12:22 +0000 (20:12 -0800)]
Merge branch 'charm' of charmgit:charm into charm

9 years agoadded statistic information about mempool
Yanhua Sun [Thu, 10 Nov 2011 04:12:15 +0000 (20:12 -0800)]
added statistic information about mempool

9 years agoMerge branch 'charm' of charmgit:charm into charm
Nikhil Jain [Thu, 10 Nov 2011 04:05:22 +0000 (22:05 -0600)]
Merge branch 'charm' of charmgit:charm into charm

9 years agochange the default split size to 8K
Akhil Langer [Thu, 10 Nov 2011 03:08:04 +0000 (03:08 +0000)]
change the default split size to 8K

9 years agoMerge branch 'charm' of charmgit:charm into charm
Nikhil Jain [Thu, 10 Nov 2011 03:02:13 +0000 (21:02 -0600)]
Merge branch 'charm' of charmgit:charm into charm

9 years agoRemove junk file added
Phil Miller [Thu, 10 Nov 2011 02:57:51 +0000 (20:57 -0600)]
Remove junk file added

9 years agochange the default split size to 8K
Akhil Langer [Thu, 10 Nov 2011 02:23:14 +0000 (02:23 +0000)]
change the default split size to 8K

9 years agoMerge branch 'charm' of charmgit:charm into charm
Nikhil Jain [Thu, 10 Nov 2011 01:29:57 +0000 (19:29 -0600)]
Merge branch 'charm' of charmgit:charm into charm

9 years agoMeshStreamer: bug fix in final reduction.
Lukasz Wesolowski [Wed, 9 Nov 2011 23:34:26 +0000 (17:34 -0600)]
MeshStreamer: bug fix in final reduction.

9 years agofixed the registration
Yanhua Sun [Wed, 9 Nov 2011 20:07:31 +0000 (12:07 -0800)]
fixed the registration

9 years agofixed 100M smp ppn5 by fragmentation
Yanhua Sun [Wed, 9 Nov 2011 06:52:01 +0000 (01:52 -0500)]
fixed 100M smp ppn5 by fragmentation

9 years agofragmentation for large msg
Yanhua Sun [Wed, 9 Nov 2011 04:11:40 +0000 (20:11 -0800)]
fragmentation for large msg

9 years agoMerge branch 'RefineSwapLB' of charmgit:charm into charm
Nikhil Jain [Sun, 6 Nov 2011 22:12:29 +0000 (16:12 -0600)]
Merge branch 'RefineSwapLB' of charmgit:charm into charm

9 years agoRefinement of strategy for RefineSwapLB
Harshitha Menon [Sun, 6 Nov 2011 21:10:08 +0000 (15:10 -0600)]
Refinement of strategy for RefineSwapLB

9 years agoafter steal, if it fails, also linear search all memblocks to free some un-used ones...
Gengbin Zheng [Sun, 6 Nov 2011 20:53:05 +0000 (12:53 -0800)]
after steal, if it fails, also linear search all memblocks to free some un-used ones, and deregister the memory.

9 years agoRefinement scheme improved
Harshitha Menon [Sun, 6 Nov 2011 08:41:31 +0000 (02:41 -0600)]
Refinement scheme improved

9 years agoRefinement improved
Harshitha Menon [Sat, 5 Nov 2011 08:38:24 +0000 (03:38 -0500)]
Refinement improved

9 years agosome minor code cleanup and comments
Gengbin Zheng [Sat, 5 Nov 2011 05:00:47 +0000 (22:00 -0700)]
some minor code cleanup and comments

9 years agowhen steal mempool succeed, should just return
Gengbin Zheng [Sat, 5 Nov 2011 03:57:08 +0000 (20:57 -0700)]
when steal mempool succeed, should just return

9 years agoMeshStreamer: added hashing of coordinate information and refactored the code
Lukasz Wesolowski [Sat, 5 Nov 2011 02:45:21 +0000 (21:45 -0500)]
MeshStreamer: added hashing of coordinate information and refactored the code
to use coordinate objects which encapsulate row, column, plane, msgType

9 years agodoes not have to clear the buffer to 0.
Gengbin Zheng [Sat, 5 Nov 2011 02:10:15 +0000 (19:10 -0700)]
does not have to clear the buffer to 0.

9 years agoMerge branch 'charm' of charmgit:charm into charm
Gengbin Zheng [Sat, 5 Nov 2011 02:05:55 +0000 (19:05 -0700)]
Merge branch 'charm' of charmgit:charm into charm

9 years agoadd a mempool stealing scheme. When running out of registered memory, for SMP version...
Gengbin Zheng [Sat, 5 Nov 2011 02:04:36 +0000 (19:04 -0700)]
add a mempool stealing scheme. When running out of registered memory, for SMP version, try to steal free memblocks from other rank on the same node.

9 years agoinitialize cmiArgDebugFlag to 0
Gengbin Zheng [Sat, 5 Nov 2011 01:59:28 +0000 (18:59 -0700)]
initialize cmiArgDebugFlag to 0

9 years agockmulticast: more docs for sendToSection
Ramprasad Venkataraman [Fri, 4 Nov 2011 22:26:54 +0000 (17:26 -0500)]
ckmulticast: more docs for sendToSection

9 years agockmcast - avoid message copying when only 1 fragment; patch provided by Gengbin
Akhil Langer [Fri, 4 Nov 2011 20:06:55 +0000 (15:06 -0500)]
ckmcast - avoid message copying when only 1 fragment; patch provided by Gengbin

9 years agoSMP uses context thread
Gengbin Zheng [Fri, 4 Nov 2011 15:33:44 +0000 (08:33 -0700)]
SMP uses context thread

9 years agofix a size bug in LrtsAlloc (should minus mempool header),
Gengbin Zheng [Fri, 4 Nov 2011 09:04:17 +0000 (02:04 -0700)]
fix a size bug in LrtsAlloc (should minus mempool header),
also fix a bug in expand mempool with size greater than default. The size should consider mempool_block size.

9 years agockmulticast: Fix recent checkin with default args gone awry
Ramprasad Venkataraman [Fri, 4 Nov 2011 01:54:54 +0000 (20:54 -0500)]
ckmulticast: Fix recent checkin with default args gone awry

9 years agoMerge branch 'charm' of charmgit:charm into charm
Akhil Langer [Fri, 4 Nov 2011 01:06:55 +0000 (20:06 -0500)]
Merge branch 'charm' of charmgit:charm into charm

9 years agoAlways do Pipeling in CkMulticast && make SPLIT_SIZE and SPLIT_THRESHOLD as run time...
Akhil Langer [Fri, 4 Nov 2011 01:06:42 +0000 (20:06 -0500)]
Always do Pipeling in CkMulticast && make SPLIT_SIZE and SPLIT_THRESHOLD as run time variables rather than compile time constants

9 years agoMeshStreamer: Added the option to let users specify when each group member
Lukasz Wesolowski [Thu, 3 Nov 2011 23:04:14 +0000 (18:04 -0500)]
MeshStreamer: Added the option to let users specify when each group member
is done inserting, instead of using quiescence. When using periodic flushing,
added an optimization to prevent unnecessary flushing if recent progress
has been made.

9 years agoMeshStreamer: reintroduced a periodic flush function to help with
Lukasz Wesolowski [Thu, 3 Nov 2011 05:02:06 +0000 (00:02 -0500)]
MeshStreamer: reintroduced a periodic flush function to help with
the use case of applications which generate additional messages
in response to streamed messages.

9 years agoMerge branch 'charm' of charmgit:charm into charm
Gengbin Zheng [Thu, 3 Nov 2011 06:04:53 +0000 (01:04 -0500)]
Merge branch 'charm' of charmgit:charm into charm

9 years agotest gfortran lib in another possible location.
Gengbin Zheng [Thu, 3 Nov 2011 06:04:03 +0000 (01:04 -0500)]
test gfortran lib in another possible location.

9 years agoMerge branch 'charm' of charmgit:charm into charm
Yanhua Sun [Wed, 2 Nov 2011 20:28:53 +0000 (13:28 -0700)]
Merge branch 'charm' of charmgit:charm into charm

9 years agoadded error information for memory registration
Yanhua Sun [Wed, 2 Nov 2011 20:28:35 +0000 (13:28 -0700)]
added error information for memory registration

9 years agoMerge branch 'charm' of charmgit:charm into charm
Gengbin Zheng [Wed, 2 Nov 2011 19:22:51 +0000 (14:22 -0500)]
Merge branch 'charm' of charmgit:charm into charm

9 years agomake receiveCombinedMessage a virtual function.
Gengbin Zheng [Wed, 2 Nov 2011 18:55:14 +0000 (13:55 -0500)]
make receiveCombinedMessage a virtual function.

9 years agoremoving stupid binary that I pushed
Harshitha Menon [Wed, 2 Nov 2011 18:49:28 +0000 (13:49 -0500)]
removing stupid binary that I pushed

9 years agoExample usage of cksequence
Harshitha Menon [Wed, 2 Nov 2011 18:47:08 +0000 (13:47 -0500)]
Example usage of cksequence

9 years agoa flag to tell if yield or not
Gengbin Zheng [Wed, 2 Nov 2011 00:10:16 +0000 (19:10 -0500)]
a flag to tell if yield or not

9 years agosignificantly simply interface
Gengbin Zheng [Tue, 1 Nov 2011 21:23:29 +0000 (16:23 -0500)]
significantly simply interface
The user only needs to provide a function call process(data), library takes care of all streaming stuff.

9 years agoMeshStreamer: function rename to improve readability and avoid confusion
Lukasz Wesolowski [Tue, 1 Nov 2011 20:18:02 +0000 (15:18 -0500)]
MeshStreamer: function rename to improve readability and avoid confusion

9 years agoMeshStreamer: Modified the "start" function name to the more descriptive "callWhenFin...
Lukasz Wesolowski [Tue, 1 Nov 2011 20:15:44 +0000 (15:15 -0500)]
MeshStreamer: Modified the "start" function name to the more descriptive "callWhenFinished"

9 years agoMeshStreamer: commented out prototype for a function which is no longer being used.
Lukasz Wesolowski [Tue, 1 Nov 2011 19:25:26 +0000 (14:25 -0500)]
MeshStreamer: commented out prototype for a function which is no longer being used.

9 years agorestrict the hack for pxshm only for cray xe and smp.
Gengbin Zheng [Tue, 1 Nov 2011 16:43:19 +0000 (11:43 -0500)]
restrict the hack for pxshm only for cray xe and smp.

9 years agoMerge branch 'charm' of charmgit:charm into charm
Gengbin Zheng [Tue, 1 Nov 2011 14:37:26 +0000 (09:37 -0500)]
Merge branch 'charm' of charmgit:charm into charm

9 years agofix for VC++
Gengbin Zheng [Tue, 1 Nov 2011 14:32:51 +0000 (09:32 -0500)]
fix for VC++

9 years agoguard ft code by ft macro
Gengbin Zheng [Tue, 1 Nov 2011 14:30:30 +0000 (09:30 -0500)]
guard ft code by ft macro

9 years agoadd a start(callback) function to omit the need for a second QD from user code to...
Gengbin Zheng [Tue, 1 Nov 2011 04:12:51 +0000 (23:12 -0500)]
add a start(callback) function to omit the need for a second QD from user code to flush the buffered message

9 years agosimilar fix for cray-xe mallinfo
Gengbin Zheng [Mon, 31 Oct 2011 17:20:53 +0000 (12:20 -0500)]
similar fix for cray-xe mallinfo

9 years agominor change about a print
Gengbin Zheng [Mon, 31 Oct 2011 17:19:18 +0000 (12:19 -0500)]
minor change about a print

9 years agoRefineSwapLB
Harshitha Menon [Mon, 31 Oct 2011 16:42:39 +0000 (11:42 -0500)]
RefineSwapLB

9 years agoSDAG: Move CCounter's pointers stars into its type string, to match changes for templ...
Phil Miller [Mon, 31 Oct 2011 13:49:18 +0000 (08:49 -0500)]
SDAG: Move CCounter's pointers stars into its type string, to match changes for template support

Now tested against the full set of Charm++ examples and tests, rather than the
couple I happened to look at.

9 years agoSDAG: simplify entry method matching logic
Phil Miller [Mon, 31 Oct 2011 07:44:47 +0000 (02:44 -0500)]
SDAG: simplify entry method matching logic

9 years agoSDAG: Consolidate handling of parameter types to improve template support
Phil Miller [Mon, 31 Oct 2011 07:43:56 +0000 (02:43 -0500)]
SDAG: Consolidate handling of parameter types to improve template support

9 years agoxi: rearrange inclusion a bit
Phil Miller [Mon, 31 Oct 2011 07:32:17 +0000 (02:32 -0500)]
xi: rearrange inclusion a bit

9 years agodon't print pid for mpi version. still print for net, which make it easy to pick...
Gengbin Zheng [Mon, 31 Oct 2011 00:50:01 +0000 (19:50 -0500)]
don't print pid for mpi version. still print for net, which make it easy to pick up a process to kill

9 years agoMerge branch 'charm' of charmgit:charm into charm
Gengbin Zheng [Mon, 31 Oct 2011 00:23:31 +0000 (19:23 -0500)]
Merge branch 'charm' of charmgit:charm into charm

9 years agoimplement CkDieNow function for net version too
Gengbin Zheng [Mon, 31 Oct 2011 00:23:07 +0000 (19:23 -0500)]
implement CkDieNow function for net version too

9 years agoclear
Xiang Ni [Mon, 31 Oct 2011 00:22:42 +0000 (19:22 -0500)]
clear

9 years agomissing initialization of total_pes when +wp is not present
Gengbin Zheng [Sun, 30 Oct 2011 22:32:04 +0000 (17:32 -0500)]
missing initialization of total_pes when +wp is not present

9 years agofix a bug in generating bufferMssage call for a when trigger function with no argument.
Gengbin Zheng [Sun, 30 Oct 2011 15:25:15 +0000 (10:25 -0500)]
fix a bug in generating bufferMssage call for a when trigger function with no argument.

9 years agoFT: print out which spare processor is used to replace the failed PE.
Gengbin Zheng [Sun, 30 Oct 2011 02:24:53 +0000 (21:24 -0500)]
FT: print out which spare processor is used to replace the failed PE.

9 years agoavoid TimerInit global synchronization under bgp for FT
Gengbin Zheng [Sun, 30 Oct 2011 01:33:13 +0000 (01:33 +0000)]
avoid TimerInit global synchronization under bgp for FT

9 years agoclean up
Gengbin Zheng [Sun, 30 Oct 2011 01:28:50 +0000 (01:28 +0000)]
clean up

9 years agoupdated
Gengbin Zheng [Sat, 29 Oct 2011 23:50:37 +0000 (18:50 -0500)]
updated

9 years agodon't test -lmpich for bgp builds
Gengbin Zheng [Sat, 29 Oct 2011 23:48:41 +0000 (23:48 +0000)]
don't test -lmpich for bgp builds

9 years agominor cleanup
Gengbin Zheng [Sat, 29 Oct 2011 22:23:01 +0000 (17:23 -0500)]
minor cleanup

9 years agoa minor optimization to find reverse buddy
Gengbin Zheng [Sat, 29 Oct 2011 22:16:00 +0000 (17:16 -0500)]
a minor optimization to find reverse buddy

9 years agoguard new function with mem checkpoint macro
Gengbin Zheng [Sat, 29 Oct 2011 22:11:05 +0000 (17:11 -0500)]
guard new function with mem checkpoint macro

9 years agoFurther reducing the size for memoryAccess to make sure that it runs on every machine
Nikhil Jain [Sat, 29 Oct 2011 16:41:17 +0000 (11:41 -0500)]
Further reducing the size for memoryAccess to make sure that it runs on every machine

9 years agoMerge branch 'charm' of charmgit:charm into charm
Harshitha Menon [Sat, 29 Oct 2011 07:05:03 +0000 (02:05 -0500)]
Merge branch 'charm' of charmgit:charm into charm

9 years agocksequence implementation with memory compaction
Harshitha Menon [Sat, 29 Oct 2011 06:52:19 +0000 (01:52 -0500)]
cksequence implementation with memory compaction